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Publications |
A1>> J AM CHEM SOC, 126 (27): 8515-8528, 2004, Structural mining: Self-consistent design on flexible protein-peptide docking and transferable binding affinity potential, Liu ZJ, Dominy BN, Shakhnovich EI
A2>> PROTEINS-Structure function & genetics, 50 (1): 49-62 JAN 1 2003, Beyond the rotamer library: Genetic algorithm combined with the disturbing mutation process for upbuilding protein side-chains, Liu ZJ, Jiang L, Gao Y, Liang SD, Chen H, Han YZ, Lai LH
A3>> PROTEINS-Structure function & genetics, 46 (2): 190-196 FEB 1 2002, Potential of mean force for protein-protein interaction studies, Jiang L, Gao Y, Mao FL, Liu ZJ, Lai LH
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1
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Modeling
the third loop of short-chain snake venom neurotoxins: Roles of
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the
short-range and long-range interactions [Abstract]
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Zhijie
Liu,
Weizhong Li, Hongyu Zhang, Yuzhen Han, Luhua Lai*
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Proteins:
Structure, Function, and Genetics Vol 42, Issue 1, 6-16, 2001
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2
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Conformational
changes accompanying with the binding of protein and
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ligand
[Abstract]
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Zhijie
Liu, Lin Jiang, Weizhong Li, Yuzhen Han and
Luhua Lai*
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Acta
Chimica Sinica (In Chinese) , Vol 58, No. 7, 772-776, 2000
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3
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Analysis
of designed protein sequences based on special folding motifs
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using
side-chain upbuilding method
[Abstract]
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Zhijie
Liu, Weizhong Li, Yuzhen Han, Luhua Lai*
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(Prepared
for Acta Phisica Chimica, In Chinese), 2000
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4
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Beyond
rotamer library: Genetic Algorithm combined with Disturbing
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Mutation
process for upbuilding protein side-chains
[Abstract]
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Zhijie
Liu, Weizhong Li, Shide Liang, Yuzhen Han,
Luhua Lai*
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(Submitted
to Journal of Computational Chemistry), 2000
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5
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Calculation
of protein surface loops using Monte-Carlo simulated annealing
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simulation
[Abstract]
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Zhijie
Liu, Fenglou Mao, Weizhong Li, Yuzhen Han
and Luhua Lai*
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Journal
of Molecular Modeling, Vol 6, 1-8, 2000
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6
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Construction
of protein binding site in scaffold structures [Abstract]
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Shide
Liang, Zhijie Liu, Weizhong Li, Lisheng Ni and
Luhua Lai*
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Biopolymers
Volume 54, Issue 7, 515-523, December 2000
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7
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Construction
of protein binding site in scaffold structures [Abstract]
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Shide
Liang, Zhijie Liu, Weizhong Li, and
Luhua Lai*
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for
The Sixth Electronic Computational Chemistry Cofference, ECCC6
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8
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Protein
loops on structurally similar scaffolds: Database and conformational
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analysis
[Abstract]
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Weizhong
Li, Zhijie Liu and Luhua Lai*
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Biopolymers,
49(6), 481-95, 1999 May
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9
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Combination
of disturbing mutation method with genetic algorithm in
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upbuilding
side chains of proteins [Abstract]
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Zhijie
Liu, Weizhong Li, Yuzhen Han, Luhua
Lai*
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Computers
and Applied Chemistry, Vol. 16, No. 5, , 349-350, 1999
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for
the seventh National Computational Chemistry Cofference, 7thNCCC
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10
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Combination
of disturbing mutation method with genetic algorithm in
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upbuilding
side chains of proteins [Abstract]
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Zhijie
Liu, Weizhong Li, Yuzhen Han, Luhua
Lai*
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for
the Fifth National Union of Computer Applied Congress, the application
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and
development of computer and the networks, the six part: artificial
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intelligence),
6-184-185, 1999
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11
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Rational
screenning in combinatorial peptide libraries of protein functional
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loop
[Abstract]
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Weizhong
Li, Zhijie Liu, Shide Liang, Yuzhen
Han, Luhua Lai*
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Chinese
Science Bulletin, Vol 44, No. 23, 2150-2154, 1999
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12
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Rational
screenning in combinatorial peptide libraries of protein functional
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loop
[Abstract]
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Weizhong
Li, Zhijie Liu, Shide Liang, Yuzhen
Han, Luhua Lai*
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Chinese
Science Bulletin (in Chinese), Vol 44, No. 16, 1718-1721, 1999
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13
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Calculation
of conformation for loops in snake venom neurotoxin [Abstract]
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Liu
Zhijie, Zhang Hongyu, Han Yuzhen, Lai
Luhua*
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Computers
and Applied Chemistry, Vol.13, Supplement 137-138, 1997
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for
the sixth National Computational Chemistry Cofference, 6thNCCC
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14
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Roles
of the short-range and long-range interactions on protein loop
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conformations
[Abstract]
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Yuzhen
Han, Zhijie Liu, Weizhong Li, Luhua
Lai
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for
international union of crystallography XVIII congress and general
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assembly,
Computers in analysis, molecular modeling and molecular
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design,
267-267, P11.03.007, August 4-13, 1999, Glasgow, Scotland, UK
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| This homepage is supported by Liu Zhijie, E-mail: lzj@paradox.harvard.edu |
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Tel:
(617)496-4368 (Lab)
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